Panels

This page lists panels implemented in iSEE and its known extensions.

iSEE

Visualise any combination of sample metadata stored in a SummarizedExperiment object.

Browser and filter sample metadata stored in a SummarizedExperiment object.

Visualise any number of features and samples in any assay stored in a SummarizedExperiment object.

Visualise up to two features in any assay stored in a SummarizedExperiment object.

Visualise any two dimensions of any dimensionality reduction result stored in a SingleCellExperiment object.

Visualise any combination of feature metadata stored in a SummarizedExperiment object.

Browser and filter feature metadata stored in a SummarizedExperiment object.

Visualise up to two samples in any assay stored in a SummarizedExperiment object.

Browse and filter any table of differential expression results embedded in a SummarizedExperiment object.

Visualise the log-transformed fold-changes of any two differential expression contrasts embedded in a SummarizedExperiment object.

Visualise the M and A values of any differential expression contrast embedded in a SummarizedExperiment object.

Visualise the P values and log-transformed fold-changes of any differential expression contrast embedded in a SummarizedExperiment object.