Project History
2024
October
Updating all pkgdown websites to opt in Bootstrap 5 (in progress).
- See the pkgdown 2.0.0 and Bootstrap 5 announcement here.
- Restores the floating table of contents on the right in the articles of the pkgdown sites.
Bumped version of all iSEE extension packages.
- Necessary to force the re-installation of those packages and the propagation of new slots in the
iSEE::DotPlotclass to all the relevant extension packages.
September
Two-day hackathon at the European Bioconductor conference 2024 (Oxford, UK).
- Resolved a considerable number of outstanding issues across all packages.
2023
September
iSEEpathways software package accepted in Bioconductor.
- Adds panels for the visualisation of gene set analyses.
iSEEde software package accepted in Bioconductor.
- Adds panels for the visualisation of differential expression analyses.
July
iSEEindex software package accepted in Bioconductor.
- Adds a landing page for listing custom sets of data sets and configurations accessible locally or online.
2022
September
iSEEhub software package accepted in Bioconductor.
- Adds a landing page for listing data sets available in the Bioconductor ExperimentHub.
June
iSEEhex software package accepted in Bioconductor.
- Adds panels for summarising scatter plots with hexagonal bins.
2021
In construction
2020
April
Release of iSEE version 2.0.0, following a refactoring of panel implementation as S4 classes.
- Opens the door to third-party implementations of panels in extension packages.
iSEEu software package accepted in Bioconductor.
- Adds panels for miscellaneous functionality, demonstrating the implementation of panel in extension packages.
2019
April
iSEE wins the Most technically impressive prize of the 1st Shiny Contest organised by RStudio Inc.
2018
June
iSEE: Interactive SummarizedExperiment Explorer published in F1000 Research.
March
2017
December
First substantial commit to the iSEE repository, when proposals for iSEE functionality were fleshed out during EuroBioC2017 (Cambridge, UK).