Preface

iSEE Sticker

The Bioconductor package iSEE provides functions to create an interactive graphical user interface (GUI) using the RStudio Shiny package for exploring data stored in SummarizedExperiment objects (Rue-Albrecht et al. 2018). This book describes how to use iSEE’s application programming interface (API) to develop new panel types for custom visualizations. We also present case studies to illustrate the development process for a variety of custom panels.

The contents of this book are intended for developers of custom panel classes, usually inside a dedicated package like iSEEu. Potential end-users of iSEE should refer to the vignettes provided on the package landing page.

References

Rue-Albrecht, K., F. Marini, C. Soneson, and A. T. L. Lun. 2018. “ISEE: Interactive Summarizedexperiment Explorer.” Journal Article. F1000Res 7: 741. https://doi.org/10.12688/f1000research.14966.1.